Information about the apt package "swarm".

Package

swarm

Version

2.1.12+dfsg-1

Priority

optional

Section

universe/science

Source

swarm-cluster

Origin

Ubuntu

Maintainer

Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>

Original Maintainer

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

Bugs

https://bugs.launchpad.net/ubuntu/+filebug

Installed Size

204 kB

Depends

libc6 (>= 2.14), libgcc1 (>= 1:3.0), libstdc++6 (>= 4.1.1)

Recommends

python

Homepage

https://github.com/torognes/swarm

Download Size

73.4 kB

APT Manual Installed

no

APT Sources

http://gb.archive.ubuntu.com/ubuntu zesty/universe amd64 Packages

Description

robust and fast clustering method for amplicon-based studies
The purpose of swarm is to provide a novel clustering algorithm to handle
large sets of amplicons. Traditional clustering algorithms results are
strongly input-order dependent, and rely on an arbitrary global clustering
threshold. swarm results are resilient to input-order changes and rely on
a small local linking threshold d, the maximum number of differences
between two amplicons. swarm forms stable high-resolution clusters, with a
high yield of biological information.

Install Info

zesty,now 2.1.12+dfsg-1 amd64

Installed Automatically

True

Files

/./
/usr/
/usr/bin/
/usr/bin/swarm*
/usr/share/
/usr/share/doc/
/usr/share/doc/swarm/
/usr/share/doc/swarm/changelog.Debian.gz
/usr/share/doc/swarm/copyright
/usr/share/doc/swarm/README.Debian
/usr/share/doc/swarm/README.html
/usr/share/man/
/usr/share/man/man1/
/usr/share/man/man1/swarm.1.gz
/usr/share/swarm/
/usr/share/swarm/scripts/
/usr/share/swarm/scripts/amplicon_contingency_table.py
/usr/share/swarm/scripts/graph_plot.py