gcloud_alpha_genomics_variants_list (1)

NAME

gcloud alpha genomics variants list - lists variants that match the search criteria

SYNOPSIS

gcloud alpha genomics variants list --reference-name=REFERENCE_NAME [--call-set-ids=CALL_SET_IDS,[...]] [--end=END] [--limit-calls=LIMIT_CALLS] [--start=START] [--variant-set-id=VARIANT_SET_ID] [--filter=EXPRESSION] [--limit=LIMIT] [--page-size=PAGE_SIZE; default=512] [--sort-by=[FIELD,...]] [--uri] [GCLOUD_WIDE_FLAG ...]

DESCRIPTION

(ALPHA) Lists variants that match the search criteria.

REQUIRED FLAGS

--reference-name=REFERENCE_NAME

Only return variants in this reference sequence.

FLAGS

--call-set-ids=CALL_SET_IDS,[...]

Restrict the list to variants which have calls from the listed call sets. If omitted, a --variant-set-id must be specified.

--end=END

The end of the window (0-based exclusive) for which variants should be returned. If unspecified or 0, defaults to the length of the reference.

--limit-calls=LIMIT_CALLS

The maximum number of calls to return.At least one variant will be returned even if it exceeds this limit.

--start=START

The beginning of the window (0-based inclusive) for which overlapping variants should be returned. If unspecified, defaults to 0.

--variant-set-id=VARIANT_SET_ID

Restrict the list to variants in this variant set. If omitted, a call set id must be included in the request.

LIST COMMAND FLAGS

--filter=EXPRESSION

Apply a Boolean filter EXPRESSION to each resource item to be listed. If the expression evaluates True, then that item is listed. For more details and examples of filter expressions, run $ gcloud topic filters. This flag interacts with other flags that are applied in this order: --flatten, --sort-by, --filter, --limit.

--limit=LIMIT

Maximum number of resources to list. The default is unlimited. This flag interacts with other flags that are applied in this order: --flatten, --sort-by, --filter, --limit.

--page-size=PAGE_SIZE; default=512

Some services group resource list output into pages. This flag specifies the maximum number of resources per page. The default is 512. Paging may be applied before or after --filter and --limit depending on the service.

--sort-by=[FIELD,...]

Comma-separated list of resource field key names to sort by. The default order is ascending. Prefix a field with ``~'' for descending order on that field. This flag interacts with other flags that are applied in this order: --flatten, --sort-by, --filter, --limit.

--uri

Print a list of resource URIs instead of the default output.

GCLOUD WIDE FLAGS

These flags are available to all commands: --account, --configuration, --flags-file, --flatten, --format, --help, --log-http, --project, --quiet, --trace-token, --user-output-enabled, --verbosity. Run $ gcloud help for details.

NOTES

This command is currently in ALPHA and may change without notice. If this command fails with API permission errors despite specifying the right project, you will have to apply for early access and have your projects registered on the API whitelist to use it. To do so, contact Support at cloud.google.com/support